STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl45Mitochondrial ribosomal protein L45. (315 aa)    
Predicted Functional Partners:
ENSCHAP00000025749
Mitochondrial ribosomal protein L15.
   
   0.990
ENSCHAP00000001326
Mitochondrial ribosomal protein L22.
   
 
 0.980
MRPL49
Mitochondrial ribosomal protein L49.
   
 
 0.977
ENSCHAP00000000372
Mitochondrial ribosomal protein L12.
   
 
 0.975
ENSCHAP00000006053
Mitochondrial ribosomal protein L46.
   
 
 0.975
ENSCHAP00000020721
Mitochondrial ribosomal protein L41.
   
 0.975
mrpl13
Mitochondrial ribosomal protein L13.
   
 
 0.973
LOC105904489
39S ribosomal protein L23, mitochondrial-like.
   
 
 0.972
mrps25
Mitochondrial ribosomal protein S25.
   
 
 0.971
ENSCHAP00000010615
Mitochondrial ribosomal protein L4.
   
 0.969
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.