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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000004486N-methylpurine DNA glycosylase. (468 aa)    
Predicted Functional Partners:
apex2
Apurinic/apyrimidinic endodeoxyribonuclease 2.
    
 0.795
ENSCHAP00000004262
annotation not available
    
 0.782
ENSCHAP00000017851
annotation not available
    
 0.782
ENSCHAP00000051855
annotation not available
    
 0.782
ENSCHAP00000054070
Elongator complex protein 1.
    
   0.662
ENSCHAP00000004481
annotation not available
     
 0.624
ENSCHAP00000017284
Nth-like DNA glycosylase 1.
   
  
 0.608
xrcc1
X-ray repair cross complementing 1.
    
 
 0.606
ENSCHAP00000053521
8-oxoguanine DNA glycosylase.
     
 0.588
ENSCHAP00000028504
Elongator acetyltransferase complex subunit 2.
    
   0.553
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.