STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000004489INO80 complex subunit Db. (894 aa)    
Predicted Functional Partners:
ccnc
Cyclin C.
    
 0.978
ENSCHAP00000048371
Mediator complex subunit 14.
   
 0.970
med23
Mediator complex subunit 23.
   
 0.969
ENSCHAP00000022934
Mediator complex subunit 15.
   
 0.965
med10
Mediator complex subunit 10.
    
 0.964
med6
Mediator complex subunit 6.
    
 0.963
ENSCHAP00000027704
annotation not available
    
 0.962
med18
Mediator complex subunit 18.
    
 0.959
ENSCHAP00000000973
Mediator complex subunit 4.
   
 0.956
med22
Mediator complex subunit 22.
    
 0.955
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.