STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000004522Danio rerio inturned planar cell polarity protein (intu), mRNA. (889 aa)    
Predicted Functional Partners:
mad2l1
Mitotic arrest deficient 2 like 1.
   
 0.993
ube2c
Ubiquitin conjugating enzyme E2 C.
   
 0.988
ENSCHAP00000009160
RAN binding protein 2.
   
 0.987
cdc27
Cell division cycle 27.
   
 0.985
cdc16
Cell division cycle 16.
   
 0.984
ENSCHAP00000050861
Anaphase promoting complex subunit 4.
   
 0.984
ENSCHAP00000011669
BUB3 mitotic checkpoint protein.
   
 0.983
cdc23
Cell division cycle 23.
  
 0.983
ENSCHAP00000042014
Anaphase promoting complex subunit 1.
    
 0.983
ENSCHAP00000043849
NIMA-related kinase 2.
   
 0.983
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.