STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000004533T-cell receptor alpha/delta variable 14.0. (124 aa)    
Predicted Functional Partners:
ENSCHAP00000015151
annotation not available
    
  0.706
ENSCHAP00000000884
annotation not available
    
  0.631
LOC105890180
Mitogen-activated protein kinase kinase kinase 3-like.
    
  0.631
ENSCHAP00000019911
Mitogen-activated protein kinase kinase kinase 3.
    
  0.631
ENSCHAP00000036989
Si:ch211-264f5.2.
    
  0.598
ENSCHAP00000040785
annotation not available
    
  0.590
ENSCHAP00000033549
Zeta chain of T cell receptor associated protein kinase 70.
    
 0.587
ENSCHAP00000042878
Spleen tyrosine kinase.
    
 0.587
ENSCHAP00000014172
Plasminogen activator, tissue.
    
  0.575
ENSCHAP00000026662
Plasminogen activator, urokinase a.
    
  0.575
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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