STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000004620Dual oxidase. (1455 aa)    
Predicted Functional Partners:
ENSCHAP00000005194
Dual oxidase 2.
 
 0.991
ENSCHAP00000047148
annotation not available
   
 0.926
ENSCHAP00000013134
Neutrophil cytosolic factor 4.
   
 0.913
ENSCHAP00000019934
Neutrophil cytosolic factor 1.
   
 0.909
LOC105906520
Cytochrome b-245 light chain.
   
 0.888
ENSCHAP00000028236
annotation not available
     
 0.888
ENSCHAP00000049809
Neutrophil cytosolic factor 2.
   
 0.854
ENSCHAP00000035585
NADPH oxidase activator 1.
   
 0.813
ENSCHAP00000003475
SH3 domain containing ring finger 3.
   
 0.771
ripk4
Receptor interacting serine/threonine kinase 4.
   
 0.718
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.