STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENDOVEndonuclease V. (268 aa)    
Predicted Functional Partners:
ENSCHAP00000033095
Protoporphyrinogen oxidase.
  
 
 0.989
hmbs
Hydroxymethylbilane synthase.
  
 0.983
ENSCHAP00000000600
Coproporphyrinogen oxidase.
  
 0.951
fech
Ferrochelatase.
  
  
 0.941
uros
Uroporphyrinogen III synthase.
  
 
 0.941
iyd
Iodotyrosine deiodinase.
    
 0.910
LOC105907801
S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase-like.
    
  0.874
ENSCHAP00000047901
Molybdenum cofactor synthesis 1.
    
  0.858
rnls
Renalase, FAD dependent amine oxidase.
     
 0.816
CDK5RAP1
CDK5 regulatory subunit associated protein 1.
  
 
 0.806
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.