close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105895508Ankyrin repeat domain-containing protein 46. (233 aa)    
Predicted Functional Partners:
ENSCHAP00000022879
UBX domain protein 7.
    
 0.984
ENSCHAP00000004468
Cullin 2.
    
 0.909
ENSCHAP00000048980
annotation not available
    
 0.750
LOC105900538
Transcription elongation factor B polypeptide 1-like.
    
 0.750
ENSCHAP00000002896
Mahogunin, ring finger 1b.
    
   0.732
ENSCHAP00000000038
Elongin B.
    
 0.724
elob
Elongin B.
    
 0.724
ENSCHAP00000028527
Copper metabolism (Murr1) domain containing 1.
    
  0.719
rnf7
Ring finger protein 7.
    
 0.717
rbx1
Ring-box 1.
    
 0.717
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.