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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000004703Apoptotic chromatin condensation inducer 1a. (673 aa)    
Predicted Functional Partners:
sap18
Sin3A associated protein 18.
   
 0.989
LOC105905291
RNA-binding protein with serine-rich domain 1.
   
 0.977
ENSCHAP00000043297
annotation not available
   
 0.977
ENSCHAP00000009999
Pinin, desmosome associated protein.
   
 0.945
ENSCHAP00000011153
Eukaryotic translation initiation factor 4A3.
    
 0.930
LOC105900893
Protein mago nashi homolog.
    
 0.904
ENSCHAP00000046207
Apoptotic chromatin condensation inducer 1b.
  
 
 
0.859
LOC105904970
THO complex subunit 4-like.
   
 0.852
ENSCHAP00000044378
annotation not available
   
 0.842
ENSCHAP00000057055
annotation not available
   
 0.840
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.