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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000004747Solute carrier family 15 member 4. (590 aa)    
Predicted Functional Partners:
ENSCHAP00000036655
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
    
 0.660
ENSCHAP00000001978
Solute carrier family 7 member 4.
   
 
 0.563
ENSCHAP00000013164
annotation not available
    
 
 0.555
ENSCHAP00000002277
Solute carrier family 47 member 2.1.
     
 0.528
ENSCHAP00000004827
Glycosyltransferase 1 domain containing 1.
      
 0.525
ENSCHAP00000026384
Solute carrier family 39 member 13.
   
 
 0.485
ENSCHAP00000001746
Splicing factor 3a, subunit 1.
      
 0.400
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.