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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000004749annotation not available (138 aa)    
Predicted Functional Partners:
ENSCHAP00000025501
CREB binding protein a.
   
 0.956
LOC105891347
Apoptosis regulator Bcl-2-like.
     
 0.865
ENSCHAP00000060104
cAMP responsive element binding protein 3-like 1.
    
0.855
ENSCHAP00000015163
annotation not available
  
  
 
0.851
ENSCHAP00000024681
E1A binding protein p300 a.
    
 0.849
ENSCHAP00000031900
E1A binding protein p300 b.
    
 0.849
CREB1
cAMP responsive element binding protein 1.
  
  
 
0.848
LOC105904318
Cyclic AMP-responsive element-binding protein 3-like.
    
0.831
CREB3L4
cAMP responsive element binding protein 3 like 4.
    
 0.831
ENSCHAP00000046359
cAMP responsive element binding protein 3-like 3a.
    
 0.831
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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