Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000004749annotation not available (138 aa)    
Predicted Functional Partners:
LOC105891347
Apoptosis regulator Bcl-2-like.
    
 0.947
LOC105889308
Apoptosis regulator Bcl-2-like.
    
 0.947
ENSCHAP00000025501
CREB binding protein a.
    
 0.913
ENSCHAP00000015163
annotation not available
  
  
 
0.902
ENSCHAP00000024681
E1A binding protein p300 a.
    
 0.881
ENSCHAP00000031900
E1A binding protein p300 b.
    
 0.881
atf2
Activating transcription factor 2.
    
 0.860
ENSCHAP00000013644
Ribosomal protein S6 kinase, polypeptide 5.
   
 0.850
ENSCHAP00000046518
Ribosomal protein S6 kinase, polypeptide 4.
   
 0.850
creb3l2
cAMP responsive element binding protein 3 like 2.
    
 0.843
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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