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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aifm1Apoptosis inducing factor mitochondria associated 1. (715 aa)    
Predicted Functional Partners:
ENSCHAP00000033279
Cytochrome b5 reductase 4.
  
 
 0.917
ENSCHAP00000030827
Peptidylprolyl isomerase Aa (cyclophilin A).
    
 0.915
LOC105889048
Apoptosis regulator BAX-like.
     
 0.905
PPIF
Peptidylprolyl isomerase F.
    
 0.901
ENSCHAP00000030296
BCL2 associated X, apoptosis regulator a.
     
 0.877
ENSCHAP00000006982
annotation not available
  
 0.873
LOC105890953
Core histone macro-H2A.2.
  
 0.873
suox
Sulfite oxidase.
   
 0.872
dao
D-amino acid oxidase.
  
 0.863
ENSCHAP00000021635
Zgc:172341.
  
 0.863
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.