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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000004848Cyclin Y. (356 aa)    
Predicted Functional Partners:
ENSCHAP00000014496
Cyclin-dependent kinase 15.
    
 0.946
cdk14
Cyclin dependent kinase 14.
    
 0.946
LOC105895699
Gap junction epsilon-1 protein-like.
     
 0.943
ENSCHAP00000002450
Cyclin-dependent kinase 17.
    
 0.873
ENSCHAP00000015028
Cyclin dependent kinase 18.
    
 0.873
cdk16
Cyclin dependent kinase 16.
    
 0.873
CDK17
Cyclin dependent kinase 17.
    
 0.873
LOC105910078
Cyclin-dependent kinase 17-like.
    
 0.873
ENSCHAP00000033815
Cyclin-dependent kinase 6.
    
 0.798
ENSCHAP00000037520
Cyclin-dependent kinase 4.
    
 0.798
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.