STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000004885annotation not available (697 aa)    
Predicted Functional Partners:
mrpl16
Mitochondrial ribosomal protein L16.
   
 0.708
hspbp1
HSPA (Hsp70) binding protein 1.
   
 0.484
LOC105890639
60S ribosomal protein L10.
   
 0.484
ENSCHAP00000027592
SIL1 nucleotide exchange factor.
   
 0.484
mrpl2
Mitochondrial ribosomal protein L2.
   
 
 0.449
mrps14
Mitochondrial ribosomal protein S14.
    
 0.438
mrps12
Mitochondrial ribosomal protein S12.
    
 0.421
ENSCHAP00000048732
Mitochondrial ribosomal protein L36.
    
 
 0.414
ENSCHAP00000002247
Mitochondrial ribosomal protein S5.
    
  0.413
mrpl20
Mitochondrial ribosomal protein L20.
    
   0.412
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.