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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000004893Mitogen-activated protein kinase 6. (727 aa)    
Predicted Functional Partners:
ENSCHAP00000017391
MAPK activated protein kinase 5.
  
 
0.987
pla2g4a
Phospholipase A2 group IVA.
    
 0.865
mapk4
Mitogen-activated protein kinase 4.
  
 
 
0.827
ENSCHAP00000041211
Neuralized E3 ubiquitin protein ligase 4.
    
 
 0.820
LOC105894965
Dual specificity mitogen-activated protein kinase kinase 6-like.
    
0.814
LOC105893604
Dual specificity mitogen-activated protein kinase kinase 6-like.
    
0.814
ENSCHAP00000000346
annotation not available
    
 0.807
ENSCHAP00000016346
Protein tyrosine phosphatase receptor type Ga.
    
 0.807
ENSCHAP00000016366
Carbonic anhydrase XVI b.
    
 0.807
ENSCHAP00000049053
Protein tyrosine phosphatase receptor type Z1a.
    
 0.807
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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