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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kiaa2013KIAA2013 ortholog. (618 aa)    
Predicted Functional Partners:
ENSCHAP00000025311
ATPase H+ transporting V0 subunit d1.
    
   0.645
ENSCHAP00000024147
ATPase H+ transporting accessory protein 1b.
    
   0.629
ENSCHAP00000040570
ATPase H+ transporting accessory protein 1a.
    
   0.629
LOC105890636
V-type proton ATPase subunit S1-like.
    
   0.570
ENSCHAP00000054337
ATPase H+ transporting accessory protein 1 like a.
    
   0.570
ENSCHAP00000034513
Vacuolar protein sorting 13 homolog D.
      
 0.539
mblac2
Metallo-beta-lactamase domain containing 2.
      
 0.528
ENSCHAP00000012299
annotation not available
      
 0.523
LOC105906248
Vacuolar ATPase assembly integral membrane protein vma21-like.
   
   0.514
ENSCHAP00000049497
HECT domain containing 3.
      
 0.499
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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