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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nmt2N-myristoyltransferase 2. (502 aa)    
Predicted Functional Partners:
acbd6
acyl-CoA binding domain containing 6.
    
 
 0.717
GNAT2
Guanine nucleotide-binding protein G(t) subunit alpha-3-like.
     
 0.621
LOC105897302
Guanine nucleotide-binding protein G(t) subunit alpha-1-like.
     
 0.621
ENSCHAP00000040268
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
     
 0.621
suox
Sulfite oxidase.
      
 0.572
metap1
Methionyl aminopeptidase 1.
   
 
 0.562
ENSCHAP00000001232
Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide a.
     
 0.529
GNAO1
G protein subunit alpha o1.
     
 0.529
ENSCHAP00000011502
annotation not available
     
 0.529
gnai1
G protein subunit alpha i1.
     
 0.529
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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