STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000004926annotation not available (311 aa)    
Predicted Functional Partners:
PTPRC
Protein tyrosine phosphatase receptor type C.
    
  0.808
ENSCHAP00000015226
Protein tyrosine phosphatase receptor type A.
    
  0.551
ptpre
Protein tyrosine phosphatase receptor type E.
    
  0.551
ENSCHAP00000040807
Protein tyrosine phosphatase receptor type Sa.
    
  0.551
ENSCHAP00000051824
Protein tyrosine phosphatase receptor type Sa.
    
  0.551
PTPRD
Protein tyrosine phosphatase receptor type D.
    
  0.551
ENSCHAP00000059906
annotation not available
    
  0.551
ENSCHAP00000060802
Protein tyrosine phosphatase receptor type Fa.
    
  0.551
ENSCHAP00000034081
Protein tyrosine kinase 7a.
    
  0.517
PTK7
Protein tyrosine kinase 7 (inactive).
    
  0.517
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.