STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000004932Peroxisomal biogenesis factor 26. (320 aa)    
Predicted Functional Partners:
pex6
Peroxisomal biogenesis factor 6.
     
 0.929
pex1
Peroxisomal biogenesis factor 1.
     
 0.737
ENSCHAP00000004539
Peroxisomal biogenesis factor 10.
     
 0.599
ENSCHAP00000002142
Peroxisomal biogenesis factor 7.
     
 0.596
pex13
Peroxisomal biogenesis factor 13.
     
 0.592
pex12
Peroxisomal biogenesis factor 12.
     
 0.592
pex16
Peroxisomal biogenesis factor 16.
     
 0.592
pex19
Peroxisomal biogenesis factor 19.
     
 0.540
ENSCHAP00000002338
Zgc:153738.
     
 0.521
ENSCHAP00000011314
Katanin p60 subunit A-like 2.
     
 0.521
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.