STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000004956TUB like protein 1b. (281 aa)    
Predicted Functional Partners:
IFT122
Intraflagellar transport 122.
    
 0.823
ttc21b
Tetratricopeptide repeat domain 21B.
    
 0.822
wdr19
WD repeat domain 19.
    
 0.816
ENSCHAP00000017412
Intraflagellar transport 140 homolog (Chlamydomonas).
    
 0.810
ENSCHAP00000043107
WD repeat domain 35.
    
 0.799
ENSCHAP00000025525
annotation not available
    
 0.727
ENSCHAP00000049977
G protein-coupled receptor 161.
     
 0.699
LOC105904852
cAMP-dependent protein kinase type II-alpha regulatory subunit-like.
   
  0.548
ENSCHAP00000045376
annotation not available
    
 
 0.539
ENSCHAP00000035284
Ankyrin repeat domain 54.
    
   0.508
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.