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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000004971Cyclin-dependent kinase 19. (489 aa)    
Predicted Functional Partners:
ccnc
Cyclin C.
   
 0.994
ENSCHAP00000048371
Mediator complex subunit 14.
    
 0.993
ENSCHAP00000027704
annotation not available
    
 0.991
ENSCHAP00000051830
annotation not available
    
 0.990
ENSCHAP00000050310
Mediator complex subunit 12.
    
 0.987
med21
Mediator complex subunit 21.
    
 0.986
med6
Mediator complex subunit 6.
    
 0.983
med23
Mediator complex subunit 23.
    
 0.981
ENSCHAP00000022934
Mediator complex subunit 15.
    
 0.980
rpl9
Ribosomal protein L9.
    
 0.980
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.