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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000005035Replication protein A2. (284 aa)    
Predicted Functional Partners:
ENSCHAP00000024514
WRN RecQ like helicase.
   
 0.999
ENSCHAP00000054339
annotation not available
   
 0.998
ENSCHAP00000013547
Replication protein A1.
   
 0.996
ENSCHAP00000005649
Replication protein A3.
   
 0.995
ENSCHAP00000015151
annotation not available
   
 0.991
ENSCHAP00000014902
annotation not available
   
 0.987
rad52
RAD52 homolog, DNA repair protein.
    
 0.985
ENSCHAP00000014529
annotation not available
   
 0.984
ENSCHAP00000058585
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1.
   
 0.978
ENSCHAP00000061282
annotation not available
   
 0.975
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.