STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000005058TP53 induced glycolysis regulatory phosphatase b. (269 aa)    
Predicted Functional Partners:
pgk1
Phosphoglycerate kinase 1.
   
 0.980
ENSCHAP00000043204
Glucose-6-phosphate isomerase b.
  
 
 0.966
ENSCHAP00000011344
Triosephosphate isomerase 1b.
  
 0.947
LOC105892014
Triosephosphate isomerase A.
  
 0.947
h6pd
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
  
 0.936
pfkfb2
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2.
   
 0.924
ENSCHAP00000009742
Transaldolase 1.
  
 0.920
ENSCHAP00000050639
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3.
   
 0.904
ENSCHAP00000060996
annotation not available
   
 0.900
ENSCHAP00000062183
Hexokinase 2.
   
 0.900
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.