STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000005062annotation not available (920 aa)    
Predicted Functional Partners:
myd88
MYD88 innate immune signal transduction adaptor.
   
 0.844
unc93b1
Unc-93 homolog B1, TLR signaling regulator.
    
 0.840
ENSCHAP00000005398
Lymphocyte antigen 86.
   
 0.803
ENSCHAP00000018748
annotation not available
   
 0.773
ENSCHAP00000055914
Netrin g1a.
    
 0.739
ENSCHAP00000003051
annotation not available
   
  0.716
ENSCHAP00000003800
annotation not available
   
  0.716
ENSCHAP00000023943
annotation not available
   
  0.716
ENSCHAP00000035260
Adhesion G protein-coupled receptor L3.1.
   
  0.716
ADGRL3
Adhesion G protein-coupled receptor L3.
   
  0.716
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.