STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000005066annotation not available (293 aa)    
Predicted Functional Partners:
PTPRC
Protein tyrosine phosphatase receptor type C.
   
 0.730
ENSCHAP00000047229
Protein tyrosine phosphatase non-receptor type 6.
   
 0.673
ptpn11
Protein tyrosine phosphatase non-receptor type 11.
   
 0.673
LOC105898973
Tyrosine-protein phosphatase non-receptor type 11-like.
   
 0.673
ENSCHAP00000025835
annotation not available
   
 0.616
ENSCHAP00000000558
Oligodendrocyte myelin glycoprotein b.
   
 0.565
ENSCHAP00000029699
Oligodendrocyte myelin glycoprotein a.
   
 0.565
ENSCHAP00000015988
Nerve growth factor receptor a (TNFR superfamily, member 16).
    
 0.502
LOC105889716
Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1.
    
 0.501
LOC105908760
Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2.
    
 0.501
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.