STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105889657Potassium channel subfamily K member 13-like. (416 aa)    
Predicted Functional Partners:
ENSCHAP00000022790
Potassium channel, subfamily K, member 4a.
   
 
0.593
KCNK4
Potassium two pore domain channel subfamily K member 4.
   
 
0.593
kcnk5
Potassium two pore domain channel subfamily K member 5.
   
 
0.574
kcnk1
Potassium two pore domain channel subfamily K member 1.
   
 
0.551
ENSCHAP00000042601
Potassium channel, subfamily K, member 1a.
   
 
0.551
LOC105899415
Potassium channel subfamily K member 5-like.
   
 
0.529
ENSCHAP00000052317
Potassium channel, subfamily K, member 17.
   
 
0.529
kcnk6
Potassium two pore domain channel subfamily K member 6.
   
 
0.527
ENSCHAP00000006439
Potassium channel, subfamily K, member 10b.
   
 
0.422
ENSCHAP00000007407
Potassium channel, subfamily K, member 10a.
   
 
0.422
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.