STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000005200hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b. (763 aa)    
Predicted Functional Partners:
hadhb
hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta.
 0.999
acaa2
acetyl-CoA acyltransferase 2.
 
 0.979
acaa1
acetyl-CoA acyltransferase 1.
 
 0.977
ENSCHAP00000014686
acetyl-CoA acetyltransferase 2.
 
 0.968
ENSCHAP00000005954
acetyl-CoA acetyltransferase 1.
 
 0.964
acadm
acyl-CoA dehydrogenase medium chain.
  
 0.957
LOC105895092
Non-specific lipid-transfer protein-like.
  
 0.951
ENSCHAP00000051341
Sterol carrier protein 2a.
  
 0.951
hsdl2
Hydroxysteroid dehydrogenase like 2.
  
 0.947
acadsb
acyl-CoA dehydrogenase short/branched chain.
  
 0.943
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.