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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000005204annotation not available (299 aa)    
Predicted Functional Partners:
PTPRC
Protein tyrosine phosphatase receptor type C.
   
 0.730
ENSCHAP00000047229
Protein tyrosine phosphatase non-receptor type 6.
   
 0.673
ptpn11
Protein tyrosine phosphatase non-receptor type 11.
   
 0.673
LOC105898973
Tyrosine-protein phosphatase non-receptor type 11-like.
   
 0.673
ENSCHAP00000018089
annotation not available
  
  
  0.672
ENSCHAP00000025835
annotation not available
   
 0.616
ENSCHAP00000018116
annotation not available
  
  
 
0.605
ENSCHAP00000000558
Oligodendrocyte myelin glycoprotein b.
   
 0.565
ENSCHAP00000029699
Oligodendrocyte myelin glycoprotein a.
   
 0.565
ENSCHAP00000015988
Nerve growth factor receptor a (TNFR superfamily, member 16).
    
 0.502
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.