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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000005356Rho GTPase activating protein 22. (656 aa)    
Predicted Functional Partners:
ENSCHAP00000016391
Macrophage stimulating 1 receptor b.
    
  0.712
ENSCHAP00000041906
Macrophage stimulating 1 receptor a.
    
  0.712
ENSCHAP00000053649
MET proto-oncogene, receptor tyrosine kinase.
    
  0.712
ENSCHAP00000018026
annotation not available
    
 0.666
LOC105906845
Cell division control protein 42 homolog.
    
 0.666
ENSCHAP00000009844
Synaptic Ras GTPase activating protein 1b.
    
 0.587
ENSCHAP00000024196
DAB2 interacting protein b.
    
 0.587
LOC105901256
Ras GTPase-activating protein 1.
    
 0.587
ENSCHAP00000043522
Synaptic Ras GTPase activating protein 1a.
    
 0.587
LOC105890812
Ras GTPase-activating protein 1-like.
    
 0.587
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.