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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000005359annotation not available (1625 aa)    
Predicted Functional Partners:
smarcb1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.
   
 0.984
ENSCHAP00000028698
AT rich interactive domain 2 (ARID, RFX-like).
   
 0.981
phf10
PHD finger protein 10.
   
 0.978
brd7
Bromodomain containing 7.
    
 0.976
ENSCHAP00000006069
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.
   
 0.967
ENSCHAP00000028991
annotation not available
    
 0.958
ENSCHAP00000030603
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1a.
   
 0.956
ENSCHAP00000008103
annotation not available
   
 0.955
ENSCHAP00000009078
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2.
   
 0.955
ENSCHAP00000009450
Polybromo 1, like.
   
0.955
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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