STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105904970THO complex subunit 4-like. (278 aa)    
Predicted Functional Partners:
ENSCHAP00000011153
Eukaryotic translation initiation factor 4A3.
   
 0.998
ENSCHAP00000043503
THO complex 2.
   
 0.997
ENSCHAP00000044378
annotation not available
    
 0.996
ENSCHAP00000048183
THO complex 5.
   
 0.993
thoc1
THO complex 1.
    
 0.992
ENSCHAP00000052523
Serrate RNA effector molecule homolog (Arabidopsis).
   
 0.992
ENSCHAP00000036871
DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B.
   
 0.991
ENSCHAP00000009160
RAN binding protein 2.
   
 0.990
thoc3
THO complex 3.
   
 0.988
thoc7
THO complex 7.
   
 0.987
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.