Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSCHAP00000005402Protein kinase C, eta, b. (714 aa)    
Predicted Functional Partners:
pdpk1
3-phosphoinositide dependent protein kinase 1.
    
 0.863
ENSCHAP00000060388
Caspase recruitment domain family, member 11.
   
 0.786
raf1
Raf-1 proto-oncogene, serine/threonine kinase.
    
 
0.779
LOC105900156
RAF proto-oncogene serine/threonine-protein kinase-like.
    
 
0.779
araf
A-Raf proto-oncogene, serine/threonine kinase.
    
 
0.779
braf
B-Raf proto-oncogene, serine/threonine kinase.
    
 
0.779
ENSCHAP00000001644
annotation not available
    
  0.744
prkci
Protein kinase C iota.
    
  0.744
ENSCHAP00000039096
annotation not available
   
 0.715
prkcq
Protein kinase C theta.
   
 0.715
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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