STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000005424annotation not available (570 aa)    
Predicted Functional Partners:
prodh2
Proline dehydrogenase 2.
  
  
 0.607
ENSCHAP00000002580
Proline dehydrogenase (oxidase) 1b.
  
  
 0.607
ENSCHAP00000060373
Proline dehydrogenase (oxidase) 1a.
  
  
 0.607
aprt
Adenine phosphoribosyltransferase.
   
  
 0.552
ENSCHAP00000027171
Solute carrier family 44 member 5a.
     
 0.510
slc44a4
Solute carrier family 44 member 4.
     
 0.510
ENSCHAP00000039477
annotation not available
     
 0.510
LOC105888598
Choline transporter-like protein 1.
     
 0.510
ENSCHAP00000055994
Solute carrier family 44 member 5b.
     
 0.510
ENSCHAP00000056249
Solute carrier family 44 member 2.
     
 0.510
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.