STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000005462Troponin T type 2b (cardiac). (197 aa)    
Predicted Functional Partners:
ENSCHAP00000005591
Troponin I type 1b (skeletal, slow).
 
 0.977
LOC105906494
Troponin I, fast skeletal muscle-like.
 
 0.951
ENSCHAP00000037851
Troponin I, skeletal, slow d.
 
 0.951
ENSCHAP00000033908
Troponin I type 2a (skeletal, fast), tandem duplicate 2.
 
 0.941
ENSCHAP00000002538
Troponin I4b, tandem duplicate 2.
  
 0.934
tpm4
Tropomyosin 4.
   
 0.931
myl1
Myosin light chain 1.
   
 0.928
ENSCHAP00000002252
annotation not available
 
 0.920
ENSCHAP00000040615
Troponin C type 2 (fast).
   
 0.910
LOC105890625
Troponin C, skeletal muscle.
   
 0.910
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.