close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000005506annotation not available (185 aa)    
Predicted Functional Partners:
ENSCHAP00000000456
annotation not available
   
 0.998
ENSCHAP00000018197
RAD18 E3 ubiquitin protein ligase.
    
 0.975
ENSCHAP00000023137
Ring finger protein 20, E3 ubiquitin protein ligase.
    
 0.963
rnf40
Ring finger protein 40.
    
 0.963
rps27a
Ribosomal protein S27a.
    
 0.950
trip12
Thyroid hormone receptor interactor 12.
    
 0.940
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.910
ENSCHAP00000054339
annotation not available
    
 0.898
pcna
Proliferating cell nuclear antigen.
   
 0.893
ENSCHAP00000039558
Ubiquitin-like modifier activating enzyme 1.
   
 0.891
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.