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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000005649Replication protein A3. (173 aa)    
Predicted Functional Partners:
ENSCHAP00000013547
Replication protein A1.
   
 0.999
ENSCHAP00000024514
WRN RecQ like helicase.
    
 0.999
ENSCHAP00000058585
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1.
    
 0.997
ENSCHAP00000005035
Replication protein A2.
   
 0.995
ENSCHAP00000035772
annotation not available
   
 0.995
ENSCHAP00000014529
annotation not available
    
 0.993
meiob
Meiosis specific with OB-fold.
   
 0.993
ENSCHAP00000054381
RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae).
    
 0.993
ENSCHAP00000057806
DNA topoisomerase III beta.
    
 0.990
CLSPN
Claspin.
    
 0.987
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.