STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000005654annotation not available (602 aa)    
Predicted Functional Partners:
dmap1
DNA methyltransferase 1 associated protein 1.
    
 0.864
ruvbl1
RuvB like AAA ATPase 1.
 
  
 0.834
ENSCHAP00000008710
TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.832
ENSCHAP00000013195
Cyclin-dependent kinase 9 (CDC2-related kinase).
    
 0.829
yeats4
YEATS domain containing 4.
    
 0.825
ENSCHAP00000024798
Craniofacial development protein 1.
    
 0.803
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.775
ENSCHAP00000014458
E1A binding protein p400.
   
 0.760
ENSCHAP00000030820
Snf2-related CREBBP activator protein.
   
 0.760
LOC105888489
ruvB-like 2.
 
  
 0.712
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.