STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000005663Wu:fj59g11. (1508 aa)    
Predicted Functional Partners:
ENSCHAP00000016927
Si:ch211-175f11.5.
    
 0.872
tln2
Talin 2.
    
 0.853
ENSCHAP00000037603
Talin 1.
    
 0.853
ENSCHAP00000031243
Src kinase associated phosphoprotein 1.
     
 0.828
rap1a
RAP1A, member of RAS oncogene family.
    
 0.826
rap1b
RAP1B, member of RAS oncogene family.
    
 0.826
LOC105901888
Ras-related protein Rap-1A-like.
    
 0.826
LOC105892101
Growth factor receptor-bound protein 2.
    
 0.807
LOC105894777
Myosin regulatory light chain 2, smooth muscle minor isoform.
    
  0.776
stoml2
Stomatin like 2.
    
  0.771
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.