STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000005763annotation not available (1025 aa)    
Predicted Functional Partners:
ENSCHAP00000008683
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
  0.966
ENSCHAP00000041910
annotation not available
    
 0.853
ENSCHAP00000006895
annotation not available
    
 0.730
ENSCHAP00000036131
Achalasia, adrenocortical insufficiency, alacrimia.
    
 0.723
gle1
GLE1 RNA export mediator.
    
 0.721
ENSCHAP00000016350
Fras1 related extracellular matrix 1a.
    
 0.694
nup35
Nucleoporin 35.
    
 0.694
ENSCHAP00000040692
Ribonucleic acid export 1.
    
 0.692
seh1l
SEH1 like nucleoporin.
    
 0.685
ENSCHAP00000024114
Glycoprotein Ib platelet subunit beta.
   
 0.684
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.