STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ranRAN, member RAS oncogene family. (244 aa)    
Predicted Functional Partners:
ENSCHAP00000009160
RAN binding protein 2.
   
 0.993
ENSCHAP00000061480
RAN binding protein 1.
   
 0.989
xpot
Exportin for tRNA.
   
 0.987
kpnb1
Karyopherin subunit beta 1.
   
 0.985
xpo5
Exportin 5.
    
 0.984
ENSCHAP00000022799
Regulator of chromosome condensation 1.
   
 0.968
ENSCHAP00000004813
Exportin 1 (CRM1 homolog, yeast) b.
   
 0.965
ENSCHAP00000016491
Exportin 1 (CRM1 homolog, yeast) a.
   
 0.965
ENSCHAP00000017737
Ran GTPase activating protein 1b.
   
 0.963
rangap1
Ran GTPase activating protein 1.
   
 0.963
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.