STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000005832annotation not available (337 aa)    
Predicted Functional Partners:
ENSCHAP00000005035
Replication protein A2.
    
 0.961
ENSCHAP00000035772
annotation not available
    
 0.961
ENSCHAP00000061282
annotation not available
     
 0.843
ENSCHAP00000004633
Calreticulin 3b.
    
  0.782
pdia3
Protein disulfide isomerase family A member 3.
    
  0.735
ENSCHAP00000009298
Protein disulfide isomerase family A, member 8.
    
  0.726
ENSCHAP00000004681
annotation not available
   
 
 0.703
LOC105896182
Protein disulfide-isomerase A3-like.
    
  0.690
stn1
STN1 subunit of CST complex.
   
 0.642
ENSCHAP00000053724
SAS-6 centriolar assembly protein.
    
 0.642
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.