STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000005979annotation not available (536 aa)    
Predicted Functional Partners:
ENSCHAP00000055116
Nuclear receptor subfamily 1, group H, member 3.
   
0.958
ENSCHAP00000039566
Nuclear receptor subfamily 1, group H, member 5.
   
0.891
nr1h4
Nuclear receptor subfamily 1 group H member 4.
   
0.891
ENSCHAP00000019849
Nuclear receptor corepressor 2.
    
 0.881
ENSCHAP00000031150
Nuclear receptor corepressor 1.
    
 0.881
PPARG
Peroxisome proliferator activated receptor gamma.
    
0.877
ENSCHAP00000041166
annotation not available
    
0.877
ENSCHAP00000007797
Thyroid hormone receptor beta.
    
0.866
ENSCHAP00000031787
Thyroid hormone receptor alpha b.
    
0.866
ENSCHAP00000022121
Peroxisome proliferator-activated receptor alpha b.
    
0.853
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.