ENSCHAP00000006011 protein (Clupea harengus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSCHAP00000006011

annotation not available (274 aa)

Predicted Functional Partners:

vamp3

0.980

ENSCHAP00000008118

0.954

ENSCHAP00000048391

0.947

snap23

0.936

ENSCHAP00000008243

0.922

snap25

0.922

ENSCHAP00000011416

0.902

vamp7

0.892

stx8

0.890

ENSCHAP00000019279

0.870

Your Current Organism:

Clupea harengus

NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCHAP00000006011	ENSCHAP00000008118	ENSCHAP00000006011	ENSCHAP00000008118	annotation not available	Vesicle-associated membrane protein 2.	0.954
ENSCHAP00000006011	ENSCHAP00000008243	ENSCHAP00000006011	ENSCHAP00000008243	annotation not available	annotation not available	0.922
ENSCHAP00000006011	ENSCHAP00000011416	ENSCHAP00000006011	ENSCHAP00000011416	annotation not available	Synaptosome associated protein 29.	0.902
ENSCHAP00000006011	ENSCHAP00000019279	ENSCHAP00000006011	ENSCHAP00000019279	annotation not available	Syntaxin 16.	0.870
ENSCHAP00000006011	ENSCHAP00000048391	ENSCHAP00000006011	ENSCHAP00000048391	annotation not available	annotation not available	0.947
ENSCHAP00000006011	snap23	ENSCHAP00000006011	ENSCHAP00000014514	annotation not available	Synaptosome associated protein 23.	0.936
ENSCHAP00000006011	snap25	ENSCHAP00000006011	ENSCHAP00000058351	annotation not available	Synaptosome associated protein 25.	0.922
ENSCHAP00000006011	stx8	ENSCHAP00000006011	ENSCHAP00000037049	annotation not available	Syntaxin 8.	0.890
ENSCHAP00000006011	vamp3	ENSCHAP00000006011	ENSCHAP00000019089	annotation not available	Vesicle associated membrane protein 3.	0.980
ENSCHAP00000006011	vamp7	ENSCHAP00000006011	ENSCHAP00000020210	annotation not available	Vesicle associated membrane protein 7.	0.892
ENSCHAP00000008118	ENSCHAP00000006011	ENSCHAP00000008118	ENSCHAP00000006011	Vesicle-associated membrane protein 2.	annotation not available	0.954
ENSCHAP00000008118	ENSCHAP00000008243	ENSCHAP00000008118	ENSCHAP00000008243	Vesicle-associated membrane protein 2.	annotation not available	0.976
ENSCHAP00000008118	ENSCHAP00000011416	ENSCHAP00000008118	ENSCHAP00000011416	Vesicle-associated membrane protein 2.	Synaptosome associated protein 29.	0.942
ENSCHAP00000008118	ENSCHAP00000019279	ENSCHAP00000008118	ENSCHAP00000019279	Vesicle-associated membrane protein 2.	Syntaxin 16.	0.954
ENSCHAP00000008118	snap23	ENSCHAP00000008118	ENSCHAP00000014514	Vesicle-associated membrane protein 2.	Synaptosome associated protein 23.	0.962
ENSCHAP00000008118	snap25	ENSCHAP00000008118	ENSCHAP00000058351	Vesicle-associated membrane protein 2.	Synaptosome associated protein 25.	0.981
ENSCHAP00000008118	stx8	ENSCHAP00000008118	ENSCHAP00000037049	Vesicle-associated membrane protein 2.	Syntaxin 8.	0.955
ENSCHAP00000008118	vamp3	ENSCHAP00000008118	ENSCHAP00000019089	Vesicle-associated membrane protein 2.	Vesicle associated membrane protein 3.	0.971
ENSCHAP00000008118	vamp7	ENSCHAP00000008118	ENSCHAP00000020210	Vesicle-associated membrane protein 2.	Vesicle associated membrane protein 7.	0.903
ENSCHAP00000008243	ENSCHAP00000006011	ENSCHAP00000008243	ENSCHAP00000006011	annotation not available	annotation not available	0.922