close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000006055annotation not available (251 aa)    
Predicted Functional Partners:
ENSCHAP00000046645
TNF superfamily member 13b.
    
 0.980
ENSCHAP00000009270
annotation not available
    
 0.970
ENSCHAP00000050664
TNF superfamily member 13.
    
 0.942
camlg
Calcium modulating ligand.
    
 
 0.802
ENSCHAP00000002379
annotation not available
    
 0.624
SCARF2
Scavenger receptor class F member 2.
    
 0.624
LOC105902263
Dickkopf-related protein 1-like.
    
 0.624
ENSCHAP00000003580
Multiple EGF-like-domains 11.
    
 0.624
C8A
Complement component C8 alpha chain-like.
    
 0.624
tnfaip6
TNF alpha induced protein 6.
    
 0.624
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.