STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000006104N-acetylglucosamine-1-phosphate transferase subunits alpha and beta. (1284 aa)    
Predicted Functional Partners:
gnptg
N-acetylglucosamine-1-phosphate transferase subunit gamma.
    
 0.954
ENSCHAP00000025747
Protein kinase C substrate 80K-H.
    
 0.905
ENSCHAP00000053617
annotation not available
    
 0.905
ENSCHAP00000025830
Synaptonemal complex protein 3.
 
  
 0.801
ENSCHAP00000005265
annotation not available
 
  
 0.729
ENSCHAP00000043106
annotation not available
     
 0.625
ppil6
Peptidylprolyl isomerase like 6.
    
  0.599
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.596
ENSCHAP00000034062
N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase.
     
 0.591
mysm1
Myb like, SWIRM and MPN domains 1.
    
  0.554
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.