STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMKLR1Chemokine-like receptor 1. (351 aa)    
Predicted Functional Partners:
lpar1
Lysophosphatidic acid receptor 1.
   
  0.725
ENSCHAP00000037565
annotation not available
    
  0.714
gnas
GNAS complex locus.
    
  0.714
ENSCHAP00000033022
Amyloid beta (A4) precursor protein b.
    
 0.712
ENSCHAP00000035961
Peter pan homolog.
    
 0.712
APP
Amyloid beta precursor protein.
    
 0.712
LOC105889474
Guanine nucleotide-binding protein subunit alpha-11.
    
  0.629
ENSCHAP00000052663
annotation not available
    
  0.629
ENSCHAP00000053577
Guanine nucleotide binding protein (G protein), alpha 14a.
    
  0.629
ENSCHAP00000038996
Annexin A1a.
    
 0.626
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.