STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000006133Phosphatidylinositol glycan anchor biosynthesis class G. (987 aa)    
Predicted Functional Partners:
ENSCHAP00000049655
Phosphatidylinositol glycan anchor biosynthesis, class F.
    
 0.992
pigk
Phosphatidylinositol glycan anchor biosynthesis class K.
    
 0.960
tmed10
Transmembrane p24 trafficking protein 10.
    
 
 0.957
pigt
Phosphatidylinositol glycan anchor biosynthesis class T.
    
 0.933
coasy
Coenzyme A synthase.
    
  0.849
pla2g4a
Phospholipase A2 group IVA.
   
 
 0.814
pigv
Phosphatidylinositol glycan anchor biosynthesis class V.
   
 0.805
ENSCHAP00000039826
Phosphatidylinositol glycan anchor biosynthesis, class B.
    
 0.793
ENSCHAP00000036655
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
   
 0.786
ENSCHAP00000039971
Glycosylphosphatidylinositol anchor attachment 1.
   
 0.735
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.