STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000006190annotation not available (1062 aa)    
Predicted Functional Partners:
ENSCHAP00000009365
Sodium channel, voltage-gated, type I like, alpha b.
    
 0.505
ENSCHAP00000062721
annotation not available
    
 0.501
ENSCHAP00000013775
Sodium channel, voltage gated, type XII, alpha a.
    
 0.492
ENSCHAP00000018571
Sodium channel, voltage gated, type VIII, alpha subunit b.
    
 0.492
ENSCHAP00000023809
Sodium channel, voltage gated, type V-like, alpha b.
    
 0.492
ENSCHAP00000052136
Sodium channel, voltage gated, type VIII, alpha subunit a.
    
 0.492
KCNE2
Potassium voltage-gated channel subfamily E regulatory subunit 2.
    
 0.442
ENSCHAP00000007812
annotation not available
  
  
 
0.441
ENSCHAP00000014161
Sodium channel, voltage-gated, type IV, alpha, a.
    
 0.420
SCN4A
Sodium voltage-gated channel alpha subunit 4.
    
 0.420
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.