STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000006211annotation not available (739 aa)    
Predicted Functional Partners:
ENSCHAP00000025836
NSE4 homolog A, SMC5-SMC6 complex component.
   
 0.969
ENSCHAP00000020409
Structural maintenance of chromosomes 5.
   
 0.964
ENSCHAP00000030492
NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase.
    
 0.963
LOC105895751
Structural maintenance of chromosomes protein 6-like.
   
 0.917
LOC105889835
Structural maintenance of chromosomes protein 6-like.
   
 0.917
ENSCHAP00000009160
RAN binding protein 2.
   
  0.889
ENSCHAP00000006175
Structural maintenance of chromosomes 3.
    
 0.843
ENSCHAP00000020250
Structural maintenance of chromosomes 1B.
   
 0.777
ENSCHAP00000032822
Structural maintenance of chromosomes 1A, like.
   
 0.777
ENSCHAP00000048206
annotation not available
   
 0.777
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.