STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000006425Zinc finger, RAN-binding domain containing 3. (1097 aa)    
Predicted Functional Partners:
ENSCHAP00000005649
Replication protein A3.
    
 0.976
ENSCHAP00000013547
Replication protein A1.
   
 0.975
pcna
Proliferating cell nuclear antigen.
   
 0.964
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.954
primpol
Primase and DNA directed polymerase.
    
 
 0.935
meiob
Meiosis specific with OB-fold.
   
 0.919
ENSCHAP00000005035
Replication protein A2.
   
 0.912
ENSCHAP00000035772
annotation not available
   
 0.912
ENSCHAP00000036037
Tonsoku-like, DNA repair protein.
    
 0.894
ENSCHAP00000035080
Xeroderma pigmentosum, complementation group A.
    
 0.881
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.